OPEN TENDER ENQUIRY DOCUMENT FOR RATE CO 109282812

The Jawaharlal Institute of Postgraduate Medical Education and Research has published a tender for "OPEN TENDER ENQUIRY DOCUMENT FOR RATE CONTRACT FOR SUPPLY OF CONSUMABLES/NON-CONSUMABLES/SERVICES FOR ICMR Genetic Project, Dept. of SURGERY" on the 02 Nov 2024. This tender belongs to Dna sequencing service category. This tender is published in Puducherry, Puducherry location. The vendors interested in this tender and related Dna sequencing service tenders can obtain further details by registering in the Tendersniper web portal. Upon registration, Tendersniper sends regular tender alerts by email specifically addressing the user requirements (i.e., keywords, location and value range). Government business is a growing area of opportunity. The businesses are encouraged to actively monitor tender opportunities and participate in them to grow their business.
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Tender Details
 Tender Title / Description
Tender Title OPEN TENDER ENQUIRY DOCUMENT FOR RATE CONTRACT FOR SUPPLY OF CONSUMABLES/NON-CONSUMABLES/SERVICES FOR ICMR Genetic Project, Dept. of SURGERY
Tender Description targeted genesequencing panelusing nextgenerationsequencing ( forthe 107 genesmentioned in theannexure one)ngs sequencing using > 80 x coverage onillumina, hiseq or xt platforms for all the samples.phred quality score of q30, for >95% of data.it should cover the complete coding segment(cds) of 107 genes given in annexure one,promoter regions of relevant genes and criticalother coding /non-coding pathogenic variants <100bp documented in the clinvar, hgmd, brcaexchange and lovd databases.primary analysis:primary analysis should generate fastq files,fastqc report, bam files. index statistics, and vcffiles. reads may be trimmed as per the qualitycriteria mentioned under sequencing so as to retainonly high-quality data. detailed workflow of theprimary analysis is to be stated in the technical bid.best practices for variant calling should be followed(standards and guidelines for the interpretation andreporting of sequence variants in cancerhttps://doi.org/10.1016%2fj.jmoldx.2016.10.002).in a
Comments targeted genesequencing panelusing nextgenerationsequencing ( forthe 107 genesmentioned in theannexure one)ngs sequencing using > 80 x coverage onillumina, hiseq or xt platforms for all the samples.phred quality score of q30, for >95% of data.it should cover the complete coding segment(cds) of 107 genes given in annexure one,promoter regions of relevant genes and criticalother coding /non-coding pathogenic variants <100bp documented in the clinvar, hgmd, brcaexchange and lovd databases.primary analysis:primary analysis should generate fastq files,fastqc report, bam files. index statistics, and vcffiles. reads may be trimmed as per the qualitycriteria mentioned under sequencing so as to retainonly high-quality data. detailed workflow of theprimary analysis is to be stated in the technical bid.best practices for variant calling should be followed(standards and guidelines for the interpretation andreporting of sequence variants in cancerhttps://doi.org/10.1016%2fj.jmoldx.2016.10.002).in a
 Important Dates
Published Date
Due Date 22 Nov 2024 00:00:00
 Estimate and EMD
Estimated Value 0.0
EMD 0 INR
Processing Fee 0 INR
 Document Links
 Purchasing Agency
 Tender No

TSID: 109282812

 Tender Type and Location
Tender Category
Tender Type
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